skip to content
Bioinformatics for DNA sequence analysis Preview this item
ClosePreview this item
Checking...

Bioinformatics for DNA sequence analysis

Author: David Posada
Publisher: New York : Humana, ©2009.
Series: Methods in molecular biology (Clifton, N.J.), v. 537.; Springer protocols (Series)
Edition/Format:   Print book : EnglishView all editions and formats
Summary:

In Bioinformatics for DNA Sequence Analysis, experts provide practical guidance and troubleshooting advice for the computational analysis of DNA sequences, covering a range of issues and methods that  Read more...

Rating:

(not yet rated) 0 with reviews - Be the first.

Subjects
More like this

 

Find a copy online

Links to this item

Find a copy in the library

&AllPage.SpinnerRetrieving; Finding libraries that hold this item...

Details

Genre/Form: Laboratory manuals
Material Type: Internet resource
Document Type: Book, Internet Resource
All Authors / Contributors: David Posada
ISBN: 9781588299109 1588299104 9781597452519 1597452513
OCLC Number: 316002768
Description: xiii, 354 pages : illustrations.
Contents: Similarity searching using BLAST / Kit J. Menlove, Mark Clement, and Keith A. Crandall --
Gene orthology assessment with OrthologID / Mary Egan [and others] --
Multiple alignment of DNA sequences with MAFFT / Kazutaka Katoh, George Asimenos, and Hiroyuki Toh --
SeqVis : a tool for detecting compositional heterogeneity among aligned nucleotide sequences / Lars Sommer Jermiin [and others] --
Selection of models of DNA evolution with jModelTest / David Posada --
Estimating maximum likelihood phylogenies with PhyML / Stéphane Guindon [and others] --
Trees from trees : construction of phylogenetic supertrees using clann / Christopher J. Creevey and James O. McInerney --
Detecting signatures of selection from DNA sequences using datamonkey / Art F.Y. Poon, Simon D.W. Frost, and Sergei L. Kosakovsky Pond --
Recombination detection and analysis using RDP3 / Darren P. Martin --
CodonExplorer : an interactive online database for the analysis of codon usage and sequence composition / Jesse Zaneveld [and others] --
Genetic code prediction for metazoan mitochondria with GenDecoder / Federico Abascal, Rafael Zardoya, and David Posada --
Computational gene annotation in new genome assemblies using GeneID / Enrique Blanco and Josep F. Abril --
Promoter analysis : gene regulatory motif identification with A-GLAM / Leonardo Mariño-Ramírez [and others] --
Analysis of genomic DNA with the UCSC Genome Browser / Jonathan Pevsner --
Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree / Jacqueline Batley and David Edwards --
Analysis of transposable element sequences using CENSOR and RepeatMasker / Ahsan Huda and I. King Jordan --
DNA sequence polymorphism analysis using DnaSP / Julio Rozas.
Series Title: Methods in molecular biology (Clifton, N.J.), v. 537.; Springer protocols (Series)
Responsibility: edited by David Posada.

Reviews

User-contributed reviews
Retrieving GoodReads reviews...
Retrieving DOGObooks reviews...

Tags

Be the first.
Confirm this request

You may have already requested this item. Please select Ok if you would like to proceed with this request anyway.

Linked Data


Primary Entity

<http://www.worldcat.org/oclc/316002768> # Bioinformatics for DNA sequence analysis
    a schema:CreativeWork, schema:Book ;
    library:oclcnum "316002768" ;
    library:placeOfPublication <http://id.loc.gov/vocabulary/countries/nyu> ;
    library:placeOfPublication <http://dbpedia.org/resource/New_York_City> ; # New York
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/analytical_methods> ; # analytical methods
    schema:about <http://id.worldcat.org/fast/832181> ; # Bioinformatics
    schema:about <http://id.loc.gov/authorities/subjects/sh85093159> ; # Nucleotide sequence
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/bioinformatik> ; # Bioinformatik
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/bioinformatics> ; # bioinformatics
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/computational_biology_methods> ; # Computational Biology--methods
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/untersuchungsmethode> ; # Untersuchungsmethode
    schema:about <http://id.loc.gov/authorities/subjects/sh00003585> ; # Bioinformatics
    schema:about <http://dewey.info/class/572.860285/e22/> ;
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/chemische_analyse> ; # Chemische Analyse
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/sequence_analysis_dna_methods> ; # Sequence Analysis, DNA--methods
    schema:about <http://id.worldcat.org/fast/1041106> ; # Nucleotide sequence
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/dns_sequenz> ; # DNS-Sequenz
    schema:about <http://experiment.worldcat.org/entity/work/data/368838517#Topic/dna_sequence> ; # dna sequence
    schema:bookFormat bgn:PrintBook ;
    schema:contributor <http://viaf.org/viaf/165317758> ; # David Posada
    schema:copyrightYear "2009" ;
    schema:datePublished "2009" ;
    schema:description "Similarity searching using BLAST / Kit J. Menlove, Mark Clement, and Keith A. Crandall -- Gene orthology assessment with OrthologID / Mary Egan [and others] -- Multiple alignment of DNA sequences with MAFFT / Kazutaka Katoh, George Asimenos, and Hiroyuki Toh -- SeqVis : a tool for detecting compositional heterogeneity among aligned nucleotide sequences / Lars Sommer Jermiin [and others] -- Selection of models of DNA evolution with jModelTest / David Posada -- Estimating maximum likelihood phylogenies with PhyML / Stéphane Guindon [and others] -- Trees from trees : construction of phylogenetic supertrees using clann / Christopher J. Creevey and James O. McInerney -- Detecting signatures of selection from DNA sequences using datamonkey / Art F.Y. Poon, Simon D.W. Frost, and Sergei L. Kosakovsky Pond -- Recombination detection and analysis using RDP3 / Darren P. Martin -- CodonExplorer : an interactive online database for the analysis of codon usage and sequence composition / Jesse Zaneveld [and others] -- Genetic code prediction for metazoan mitochondria with GenDecoder / Federico Abascal, Rafael Zardoya, and David Posada -- Computational gene annotation in new genome assemblies using GeneID / Enrique Blanco and Josep F. Abril -- Promoter analysis : gene regulatory motif identification with A-GLAM / Leonardo Mariño-Ramírez [and others] -- Analysis of genomic DNA with the UCSC Genome Browser / Jonathan Pevsner -- Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree / Jacqueline Batley and David Edwards -- Analysis of transposable element sequences using CENSOR and RepeatMasker / Ahsan Huda and I. King Jordan -- DNA sequence polymorphism analysis using DnaSP / Julio Rozas."@en ;
    schema:exampleOfWork <http://worldcat.org/entity/work/id/368838517> ;
    schema:genre "Laboratory manuals"@en ;
    schema:inLanguage "en" ;
    schema:isPartOf <http://experiment.worldcat.org/entity/work/data/368838517#Series/springer_protocols> ; # Springer protocols
    schema:isPartOf <http://worldcat.org/issn/1064-3745> ; # Methods in molecular biology (Clifton, N.J.) ;
    schema:isPartOf <http://experiment.worldcat.org/entity/work/data/368838517#Series/springer_protocols_series> ; # Springer protocols (Series)
    schema:name "Bioinformatics for DNA sequence analysis"@en ;
    schema:productID "316002768" ;
    schema:publication <http://www.worldcat.org/title/-/oclc/316002768#PublicationEvent/new_york_humana_2009> ;
    schema:publisher <http://experiment.worldcat.org/entity/work/data/368838517#Agent/humana> ; # Humana
    schema:url <http://www.springerprotocols.com/BookToc/doi/10.1007/978-1-59745-251-9> ;
    schema:workExample <http://worldcat.org/isbn/9781588299109> ;
    schema:workExample <http://worldcat.org/isbn/9781597452519> ;
    wdrs:describedby <http://www.worldcat.org/title/-/oclc/316002768> ;
    .


Related Entities

<http://dbpedia.org/resource/New_York_City> # New York
    a schema:Place ;
    schema:name "New York" ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Series/springer_protocols> # Springer protocols
    a bgn:PublicationSeries ;
    schema:hasPart <http://www.worldcat.org/oclc/316002768> ; # Bioinformatics for DNA sequence analysis
    schema:name "Springer protocols" ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Series/springer_protocols_series> # Springer protocols (Series)
    a bgn:PublicationSeries ;
    schema:hasPart <http://www.worldcat.org/oclc/316002768> ; # Bioinformatics for DNA sequence analysis
    schema:name "Springer protocols (Series)" ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Topic/analytical_methods> # analytical methods
    a schema:Intangible ;
    schema:name "analytical methods"@en ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Topic/chemische_analyse> # Chemische Analyse
    a schema:Intangible ;
    schema:name "Chemische Analyse"@en ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Topic/computational_biology_methods> # Computational Biology--methods
    a schema:Intangible ;
    schema:name "Computational Biology--methods"@en ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Topic/sequence_analysis_dna_methods> # Sequence Analysis, DNA--methods
    a schema:Intangible ;
    schema:name "Sequence Analysis, DNA--methods"@en ;
    .

<http://experiment.worldcat.org/entity/work/data/368838517#Topic/untersuchungsmethode> # Untersuchungsmethode
    a schema:Intangible ;
    schema:name "Untersuchungsmethode"@en ;
    .

<http://id.loc.gov/authorities/subjects/sh00003585> # Bioinformatics
    a schema:Intangible ;
    schema:name "Bioinformatics"@en ;
    .

<http://id.loc.gov/authorities/subjects/sh85093159> # Nucleotide sequence
    a schema:Intangible ;
    schema:name "Nucleotide sequence"@en ;
    .

<http://id.worldcat.org/fast/1041106> # Nucleotide sequence
    a schema:Intangible ;
    schema:name "Nucleotide sequence"@en ;
    .

<http://id.worldcat.org/fast/832181> # Bioinformatics
    a schema:Intangible ;
    schema:name "Bioinformatics"@en ;
    .

<http://viaf.org/viaf/165317758> # David Posada
    a schema:Person ;
    schema:familyName "Posada" ;
    schema:givenName "David" ;
    schema:name "David Posada" ;
    .

<http://worldcat.org/isbn/9781588299109>
    a schema:ProductModel ;
    schema:isbn "1588299104" ;
    schema:isbn "9781588299109" ;
    .

<http://worldcat.org/isbn/9781597452519>
    a schema:ProductModel ;
    schema:isbn "1597452513" ;
    schema:isbn "9781597452519" ;
    .

<http://worldcat.org/issn/1064-3745> # Methods in molecular biology (Clifton, N.J.) ;
    a bgn:PublicationSeries ;
    schema:hasPart <http://www.worldcat.org/oclc/316002768> ; # Bioinformatics for DNA sequence analysis
    schema:issn "1064-3745" ;
    schema:name "Methods in molecular biology (Clifton, N.J.) ;" ;
    schema:name "Methods in molecular biology," ;
    .

<http://www.springerprotocols.com/BookToc/doi/10.1007/978-1-59745-251-9>
    rdfs:comment "Available to Stanford-affiliated users at:" ;
    .


Content-negotiable representations

Close Window

Please sign in to WorldCat 

Don't have an account? You can easily create a free account.