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Computational biology : a practical introduction to biodata processing and analysis with Linux, MySQL, and R

Author: Röbbe Wünschiers
Publisher: Berlin ; New York : Springer, ©2013.
Edition/Format:   eBook : Document : English : 2nd edView all editions and formats
Summary:
This greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl- data management with the relational database system MySQL, and- data analysis and visualization with the statistical computing environment R for students and practitioners in the life sciences. Although written for beginners, experienced researchers in areas involving  Read more...
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Genre/Form: Electronic books
Additional Physical Format: Printed edition:
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Röbbe Wünschiers
ISBN: 9783642347498 3642347495 3642347487 9783642347481
OCLC Number: 827003953
Description: 1 online resource (xxix, 449) : illustrations (some color)
Contents: Whetting Your Appetite --
Introduction --
Content of This Book --
Computer & Operating Systems --
Unix/Linux --
Working with Linux --
The First Touch --
Working with Files --
Remote Connections --
Playing with Text and Data Files --
Using the Shell --
Installing BLAST and ClustalW --
Shell Programming --
Regular Expressions --
Sed --
Programming --
AWK --
Perl --
Other Programming Languages --
Advanced Data Analysis --
Relational Databases with MySQL --
The Statistics Suite R --
Worked Examples --
Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4 --
Limits of BLAST and Homology Modeling --
Virtual Sequencing of pUC18c --
Querying for Potential Redox-Regulated Enzymes.
Responsibility: Röbbe Wünschiers.

Abstract:

In its revised and extended second edition, this book covers the basics of bioinformatics/information technology: programming with Bash, Sed and AWK, and the respective terminology. Case studies,  Read more...

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rofessional audiences." (V. Mathura, Choice, Vol. 51 (3), November, 2013)

 
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