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Computational peptidology

Author: Peng Zhou; Jian Huang, (Biologist)
Publisher: New York, NY : Humana Press, [2015] ©2015
Series: Methods in molecular biology (Clifton, N.J.), v. 1268.
Edition/Format:   eBook : Document : EnglishView all editions and formats
Summary:
In this volume expert researchers detail "in silico" methods widely used to study peptides. These include methods and techniques covering the database, molecular docking, dynamics simulation, data mining, de novo design and structure modeling of peptides and protein fragments. Chapters focus on integration and application of technologies to analyze, model, identify, predict, and design a wide variety of bioactive  Read more...
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Genre/Form: Electronic books
Laboratory manuals
Additional Physical Format: Print version:
Computational peptidology.
New York, NY : Humana Press, [2015]
(DLC) 2014958477
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Peng Zhou; Jian Huang, (Biologist)
ISBN: 9781493922857 1493922858 149392284X 9781493922840
OCLC Number: 900643309
Description: 1 online resource (xi, 338 pages) : illustrations (some color).
Contents: De novo peptide structure prediction : an overview / Pierre Thévenet [and three others] --
Molecular modeling of peptides / Krzysztof Kuczera --
Improved methods for classification, prediction, and design of antimicrobial peptides / Guangshun Wang --
Building MHC class II epitope predictor using machine learning approaches / Loan Ping Eng, Tin Wee Tan, and Joo Chuan Tong --
Brownian dynamics simulation of peptides with the University of Houston Brownian Dynamics (UHBD) program / Tongye Shen and Chung F. Wong --
Computational prediction of short linear motifs from protein sequences / Richard J. Edwards and Nicolas Palopoli --
Peptide toxicity prediction / Sudheer Gupta [and five others] --
Synthetic and structural routes for the rational conversion of peptides into small molecules / Pasqualina Liana Scognamiglio, Giancarlo Morelli, and Daniela Marasco --
In silico design of antimicrobial peptides / Giuseppe Maccari, Mariagrazia Di Luca, and Riccardo Nifosì --
Information-driven modeling of protein-peptide complexes / Mikael Trellet, Adrien S.J. Melquiond, and Alexandre M.J.J. Bonvin --
Computational approaches to developing short cyclic peptide modulators of protein-protein interactions / Fergal J. Duffy, Marc Devocelle, and Denis C. Shields --
A use of homology modeling and molecular docking methods : to explore binding mechanisms of nonylphenol and bisphenol A with antioxidant enzymes / Mannu Jayakanthan [and three others] --
Computational peptide vaccinology / Johannes Söllner --
Computational modeling of peptide-aptamer binding / Kristen L. Rhinehardt, Ram V. Mohan, and Goundla Srinivas.
Series Title: Methods in molecular biology (Clifton, N.J.), v. 1268.
Responsibility: edited by Peng Zhou, Jian Huang.

Abstract:

In this volume expert researchers detail in silico methods widely used to study peptides. Chapters focus on integration and application of technologies to analyze, model, identify, predict, and  Read more...

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