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Evolutionary computation in gene regulatory network research

Author: Hitoshi Iba; Nasimul Noman
Publisher: Malden, MA : Wiley, 2016.
Series: Wiley series on bioinformatics.
Edition/Format:   eBook : Document : EnglishView all editions and formats
Summary:
"This book is a step-by-step guideline for research in gene regulatory networks (GRN) using evolutionary computation (EC)"--
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Genre/Form: Electronic books
Additional Physical Format: Print version:
Evolutionary computation in gene regulatory network research.
Malden, MA : Wiley, 2016
(DLC) 2015043774
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Hitoshi Iba; Nasimul Noman
ISBN: 9781119079774 1119079772 9781119079781 1119079780 9781119079453 1119079454 1118911512 9781118911518
OCLC Number: 932302629
Description: 1 online resource.
Contents: I: Preliminaries --
A Brief Introduction to Evolutionary and other Nature-Inspired Algorithms / Nasimul Noman and Hitoshi Iba --
Mathematical Models and Computational Methods for Inference of Genetic Networks / Tatsuya Akutsu --
Gene Regulatory Networks: Real Data Sources and Their Analysis / Yuji Zhang --
II: EAs for Gene Expression Data Analysis and GRN Reconstruction --
Biclustering Analysis of Gene Expression Data Using Evolutionary Algorithms / Alan Wee-Chung Liew --
Inference of Vohradský's Models of Genetic Networks Using a Real-Coded Genetic Algorithm / Shuhei Kimura --
GPU-Powered Evolutionary Design of Mass-Action-Based Models of Gene Regulation / Marco S. Nobile, Davide Cipolla, Paolo Cazzaniga and Daniela Besozzi --
Modelling Dynamic Gene Expression in Streptomyces Coelicolor: Comparing Single and Multi-Objective Setups / Spencer Angus Thomas, Yaochu Jin, Emma Laing and Colin Smith --
Reconstruction of Large-Scale Gene Regulatory Network Using S-system Model / Ahsan Raja Chowdhury and Madhu Chetty --
III: EAs for Evolving GRNs and Reaction Networks --
Design Automation of Nucleic Acid Reaction System Simulated by Chemical Kinetics Based on Graph Rewriting Model / Ibuki Kawamata and Masami Hagiya --
Using Evolutionary Algorithms to Study the Evolution of Gene Regulatory Networks Controlling Biological Development / Alexander Spirov and David Holloway --
Evolving GRN-inspired In Vitro Oscillatory Systems / Quang Huy Dinh, Nathanael Aubert, Nasimul Noman, Hitoshi Iba and Yannic Rondelez --
IV: Applications of GRN with EAs --
Artificial Gene Regulatory Networks for Agent Control / Sylvain Cussat-Blanc, Jean Disset, Stéphane Sanchez and Yves Duthen --
Evolving H-GRNs for Morphogenetic Adaptive Pattern Formation of Swarm Robots / Hyondong Oh and Yaochu Jin --
Regulatory Representations in Architectural Design / Daniel Richards and Martyn Amos --
Computing with Artificial Gene Regulatory Networks / Michael A. Lones.
Series Title: Wiley series on bioinformatics.
Responsibility: edited by Hitoshi Iba, Nasimul Noman.

Abstract:

Introducing a handbook for gene regulatory network research using evolutionary computation, with applications for computer scientists, computational and system biologists This book is a step-by-step  Read more...

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