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Imaging in neuroscience and development : a laboratory manual

Author: Rafael Yuste; Arthur Konnerth
Publisher: Cold Spring Harbor, N.Y. : Cold Spring Harbor Laboratory Press, ©2005.
Edition/Format:   Print book : EnglishView all editions and formats
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Genre/Form: Laboratory Manuals
Laboratory manuals
Manuels de laboratoire
Additional Physical Format: Online version:
Imaging in neuroscience and development.
Cold Spring Harbor, N.Y. : Cold Spring Harbor Laboratory Press, ©2005
(OCoLC)607589283
Material Type: Internet resource
Document Type: Book, Internet Resource
All Authors / Contributors: Rafael Yuste; Arthur Konnerth
ISBN: 0879696893 9780879696894 0879696923 9780879696924
OCLC Number: 56730694
Description: xvi, 854 pages : illustrations (some color) ; 28 cm
Contents: Machine derived contents note: Contents --
Imaging in Neuroscience & Development: A Laboratory Manual --
Dedication, --
Foreword, --
Preface, --
Acknowledgments, --
Abbreviations, --
Section 1: Basic Imaging --
1 Maintaining Live Cells and Tissue Slices in the Imaging Setup --
M.E. Dailey, G.S. Marrs, and D. Kurpius --
2 Video Microscopy, Video Cameras, and Image Enhancement --
M. Oshiro, L.A. Moomaw, amd E. Keller --
3 The Application of Scientific-grade CCD Cameras to Biological Imaging --
M. Christenson --
4 A practical guide to : Differential interference Contrast (DIC) Imaging of Living Cells --
N.E. Ziv and J. Schiller --
5 A practical guide to : Infrared Videomicroscopy --
H.-U. Dodt --
6 Confocal Microscopy: Principles and Practice --
A. Fine --
7 Principles of Multiphoton-excitation Fluorescence Microscopy --
W. Denk --
8 Two-photon Microscopy for 4D Imaging of Living Neurons --
S.M. Potter --
9 A practical guide to Building a Two-photon Laser Scanning Microscope (TPLSM) --
J. Mertz --
10 A practical guide: How to Build a Two-photon Microscope using a Confocal Scan Head --
V. Nikolenko and R. Yuste --
Section 2: Imaging Development --
11 In vivo Electroporation during Embryogenesis --
C.E. Krull, R. McLennan, S. O'Connell, Y. Chen, and P.A. Trainor --
12 A practical guide to: In Vivo Electroporation of Neurons --
S.R. Price --
13 Single Neuron Labeling using Genetic Methods --
L. Luo --
14 Ballistic delivery of dyes for Structural and Functional Studies of the Nervous System --
W.-B. Gan, J. Grutzendler, R.O. Wong, and J.W. Lichtman --
15 Imaging Embryonic Development in Caenorhabditis elegans --
W.A. Mohler and A.B. Isaacson --
16 Visualizing Morphogenesis in Frog Embryos --
L.A. Davidson and J.B. Wallingford --
17 In vivo Imaging of Synaptogenesis in the Embryonic Zebrafish --
J.D. Jontes and S.J. Smith --
18 A practical guide to : In ovo imaging of avian embryogenesis --
P.M. Kulesa and S.E. Fraser --
19 A practical guide to: Time-lapse Imaging of the Formation of the Chick Peripheral Nervous System --
J.C. Kasemeier, F. Lefcort, S.E. Fraser, and P.M. Kulesa --
20 Imaging Mouse Embryonic Development --
E.A.V. Jones, A.-K. Hadjantonakis, and M.E. Dickinson --
21 Live Imaging of the Developing Retina --
C. Lohmann, J. Mumm, J. Morgan, L. Godinho, E. Schroeter, R. Stacy, W.T. Wong, D. Oakley, and R.O.L. Wong --
22 A practical guide to: Long-term Two-photon Transcranial Imaging of Synaptic Structures in the Living Brain --
J. Grutzendler and W.-B. Gan --
23 In Vivo Time-Lapse Imaging of Neuronal Development --
E.S. Ruthazer, K. Haas, A. Javaherian, K. Jensen, W.C. Sin, and H.T. Cline --
24 Optical Projection Tomography: Imaging 3D Organ Shapes and Gene Expression Patterns in Whole Vertebrate Embryos --
J. Sharpe --
25 Imaging the Development of Neuromuscular Junction --
M.K. Walsh and J.W. Lichtman --
26 A practical guide to: Imaging Synaptogenesis by Measuring Accumulation of Synaptic Proteins --
C. Dean and P. Scheiffele --
27 A practical guide to: Imaging Retinotectal Synaptic Connectivity --
S. Cohen-Corey --
28 A practical guide to: Intrinsic Optical Imaging of Functional Map Development in Mammalian Visual Cortex --
T. Bonhoeffer and M. H#x83;bener --
Section 3: Calcium Imaging --
29 How Calcium Indicators Work --
S.R. Adams --
30 Some Quantitative Aspects of Calcium Fluorimetry --
E. Neher --
31 Calibration of Fluorescent Calcium Indicators --
F. Helmchen --
32 A Single-compartment Model of Calcium Dynamics in Nerve Terminals and Dendrites --
F. Helmchen and D.W. Tank --
33 A practical guide to : Dye loading with Patch Pipettes --
J. Eilers and A. Konnerth --
34 A practical guide to : Calcium Imaging of the Retina --
C. Lohmann, J. Demas, J.L. Morgan, and R.O.L. Wong --
35 Calcium Imaging of Identified Astrocytes in Hippocampal Slices --
J. Kang, G. Arcuino, and M. Nedergaard --
36 A practical guide to: Imaging Microscopic Calcium Signals in Excitable Cells --
M.B. Cannell, A.J.C. McMorland, and C. Soeller --
37 A practical guide to : Monitoring Presynaptic Calcium Dynamics with Membrane-permeant Indicators --
W.G. Regehr --
38 A practical guide to : Two-Photon Calcium Imaging of Spines and Dendrites --
J.H. Goldberg and R. Yuste --
39 A practical guide to : Measurements of Free Ca2+ Concentration in the Lumen of Neuronal Endoplasmic Reticulum --
N. Solovyova and A. Verkhratsky --
40 A practical guide to: Imaging Intracellular Calcium-concentration Microdomains at a Chemical Synapse --
R. Llinçs and M. Sugimori --
41 A practical guide to: Monitoring Intramitochondrial Calcium with Rhod-2 --
M. Hoth and R.S. Lewis --
42 A practical guide to: Generation of Controlled Calcium Oscillations in Nonexcitable Cells --
R.E. Dolmetsch and R.S. Lewis --
43 A practical guide to: High-Speed Imaging of Calcium Waves in Neurons in Brain --
W.N. Ross, T. Nakamura, S. Watanabe, M.E. Larkum, and N. Lasser-Ross --
44 A practical guide to: Imaging Action Potentials with Calcium Indicators --
J.N. MacLean and R. Yuste --
45 Imaging Calcium Transients in Developing Xenopus Spinal Neurons --
N.C. Spitzer, L.N. Borodinsky, and C.M. Root --
Section 4: Photoactivation --
46 Basics of Photoactivation --
G.C.R. Ellis-Davies --
47 A practical guide to: Two-photon Uncaging Microscopy --
H. Kasai, M. Matsuzaki, and G.C.R. Ellis-Davies --
48 A practical guide to : Chemical Two-photon Uncaging --
D.L. Pettit and G.J. Augustine --
49 A practical guide to: Uncaging with Visible Light ( Inorganic Caged Compounds --
L. Zayat, L. Beraldo, and R. Etchenique --
50 A practical guide to : Infrared-guided Laser Stimulation of Neurons in Brain Slices --
H.-U. Dodt, M. Eder, A. Schierloh, and W. Zieglgènsberger --
51 Uncaging Calcium in Neurons --
KR. Delaney and V. Shahrezaei --
52 A practical guide to : Building a Simple Uncaging System --
K. Kandler, G. Kim, and B. Schmidt --
53 A practical guide to : Ca2+ Uncaging in Nerve Terminals --
R. Schneggenburger --
54 A practical guide to: Direct Multi-photon Stimulation of Neurons and Spines --
H. Hirase, V. Nikolenko, and R. Yuste --
Section 5: Advanced Imaging and Special Applications --
55 A practical guide to : Imaging Microglia in Live Brain Slices and Slice Cultures --
D. Kurpius and M.E. Dailey --
56 Single and Multiphoton Fluorescence Recovery after Photobleaching (FRAP) --
E. Brown, A. Majewska, and R.K. Jain --
57 A practical guide to : All-optical, In-situ Histology of Neuronal Tissue with Ultrashort Laser Pulses --
P.S. Tsai, B. Friedman, C.B. Schaffer, J.A. Squier, and D. Kleinfeld --
58 Imaging with Voltage-sensitive Dyes: Spike Signals, Population Signals, and Retrograde Transport --
E. Kosmidis, L.B. Cohen, C.X. Falk, J.-Y. Wu, and B. Baker --
59 A practical guide to : Dendritic Voltage Imaging --
M. Djurisic, S. Antic, and D. Zecevic --
60 Second Harmonic Imaging of Membrane Potential --
A.C. Millard, A Lewis and LM. Loew --
61 Imaging Synaptic Vesicle Dynamics with Styryl Dyes --
S.O. Rizzoli, U. Becherer, J. Angleson, and W.J. Betz --
62 A practical guide to : Imaging FM Dyes in Brain Slices --
A.R. Kay --
63 A practical guide to: Imaging Zinc in Brain Slices --
A.R. Kay --
64 Imaging Exocytosis with Total Internal Reflection Microscopy --
D. Zenisek and D. Perrais --
65 A practical guide to : Measuring the Multiple Light Scattering Changes Associated with Secretion from Peptidergic Nerve Terminals --
B.M. Salzberg, M. Muschol, and A.L. Obaid --
66 Imaging with Quantum Dots --
J.K. Jaiswal, E.R. Goldman, H. Mattoussi, and S.M. Simon --
67 A practical guide to: Imaging Single Receptors with Quantum Dots --
S. LÄvi, M. Dahan, and A. Triller --
68 A practical guide to : Tracking Receptors by Optical Imaging of Single Molecules --
L. Cognet, B. Lounis, and D. Choquet --
69 A practical guide to : Imaging Sodium in Dendrites --
W. Ross, J.C. Callaway, and N. Lasser-Ross --
70 A practical guide to : Two-photon Sodium Imaging in Dendritic Spines --
C.R. Rose --
71 A practical guide to : Two-photon Imaging of Chloride --
O. Garaschuk and A. Konnerth --
72 A practical guide to: Interferometric Detection of Action Potentials --
A. LaPorta and D. Kleinfeld --
73 A practical guide to: Intrinsic Optical Signal Imaging in Brain Slices --
B.A. MacVicar and S.J. Mulligan --
Section 6: Genetically Engineered Fluorescent Probes --
74 Indicators Based on Fluorescence Resonance Energy Transfer --
R.Y. Tsien --
75 Cellular Imaging of Bioluminescence --
J.D. Plautz and S.A. Kay --
76 Introduction of Green Fluorescent Protein into Hippocampal Neuron Through Viral Infection --
R. Malinow, Y. Hayashi, M. Maletic-Savatic, S.H. Zaman, J.-C. Poncer, S.-H. Shi, J.A. Esteban, P. Osten, and K. Seidenman --
77 A practical guide to : Grene Fluorescent Proteins for Measuring Voltage --
M.S. Siegel and E.Y. Isacoff --
78 Genetic Probes for Calcium Dynamics --
A. Miyawaki, T. Nagai, and H. Mizuno --
79 A practical guide to: Targeted Recombinant Aequorins --
T. Pozzan and R. Ruzzuto --
80 A practical guide to : Imaging Synaptic Inhibition with Clomeleon, A Genetically Encoded Chloride Indicator --
K. Berglund, R.L. Dunbar, P. Lee, G. Feng, and G.J. Augustine --
81 A practical guide to : Synapto-pHluorins: Genetically Encoded Reporters of Synaptic Transmission --
G. MiesenbÜck --
82 Imaging Gene Expression in Live Cells and Tissues --
R.E. Dolmetsch, N. Gomez, E. Green, and E.A. Nigh --
83 A practical guide to: Imaging Olfactory Activity in Drosophila CNS with a Calcium-sensitive Green Fluorescent Protein --
A.M. Wong, J. Fl.
Responsibility: edited by Rafael Yuste, Arthur Konnerth.
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