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ADP-ribosylation and NAD+ utilizing enzymes : methods and protocols

Author: Paul Chang
Publisher: New York, NY : Humana Press, 2018.
Series: Methods in molecular biology (Clifton, N.J.), v. 1813.
Edition/Format:   eBook : Document : EnglishView all editions and formats
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Genre/Form: Electronic books
Laboratory manuals
Additional Physical Format: (OCoLC)1029887020
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Paul Chang
ISBN: 9781493985883 1493985884
OCLC Number: 1048457701
Notes: Includes index.
Description: 1 online resource (xiv, 417 pages) : illustrations (some color).
Contents: Vitamin B3 in health and disease : toward the second century of discovery / Myron K. Jacobson and Elaine L. Jacobson --
Monitoring poly(ADP-Ribosyl)ation in response to DNA damage in live cells using fluorescently tagged macrodomains / Rebecca Smith and Gyula Timinszky --
In vitro techniques for ADP-ribosylated substrate identification / Giovanna Grimaldi, Giuliana Catara, Carmen Valente, and Daniela Corda --
Assessment of intracellular auto-modification levels of ARTD10 using mono-ADP-ribose-specific macrodomains 2 and 3 of murine Artd8 / Mareike Bütepage, Sarah Krieg, Laura Eckei, Jinyu Li, Giulia Rossetti, Patricia Verheugd, and Bernhard Lüscher --
Biochemical and biophysical assays of PAR-WWE domain interactions and production of iso-ADPr for PAR-binding analysis / Zhizhi Wang and Wenqing Xu --
Assays for NAD+-dependent reactions and NAD+ metabolites / Michael B. Schultz, Yuancheng Lu, Nady Braidy, and David A. Sinclair --
Generating protein-linked and protein-free mono-, oligo-, and poly(ADP-ribose) in vitro / Ken Y. Lin, Dan Huang, and W. Lee Kraus --
Methods to study TCDD-inducible poly-ADP-ribose polymerase (TIPARP) mono-ADP-ribosyltransferase activity / David Hutin, Giulia Grimaldi, and Jason Matthews --
Dictyostelium as a model to assess site-specific ADP-ribosylation events / Anna-Lena Kolb, Duen-Wei Hsu, Ana B. A. Wallis, Seiji Ura, Alina Rakhimova, Catherine J. Pears, and Nicholas D. Lakin --
Mono-ADP-ribosylation catalyzed by arginine-specific ADP-ribosyltransferases / Linda A. Stevens and Joel Moss --
Monitoring expression and enzyme activity of ecto-ARTCs / Stephan Menzel, Sahil Adriouch, Peter Bannas, Friedrich Haag, and Friedrich Koch-Nolte --
ADP-ribosyl-acceptor hydrolase activities catalyzed by the ARH family of proteins / Masato Mashimo and Joel Moss --
Mono-ADP-ribosylhydrolase assays / Jeannette Abplanalp, Ann-Katrin Hopp, and Michael O. Hottiger --
Hydrolysis of ADP-ribosylation by macrodomains/ Melanija Posavec Marjanovic, Gytis Jankevicius, and Ivan Ahel --
HPLC-based enzyme assays for sirtuins / Jun Young Hong, Xiaoyu Zhang, and Hening Lin --
Small-molecule screening assay for mono-ADP-ribosyltransferases / Teemu Haikarainen, Sudarshan Murthy, Mirko M. Maksimainen, and Lari Lehtiö --
Simple, sensitive, and generalizable plate assay for screening PARP inhibitors / Ilsa T. Kirby, Rory K. Morgan, and Michael S. Cohen --
Nonlocalized searching of HCD data for fast and sensitive identification of ADP-ribosylated peptides / Thomas Colby, Juan José Bonfiglio, and Ivan Matic --
Quantitative determination of MAR hydrolase residue specificity in vitro by tandem mass spectrometry / Robert Lyle McPherson, Shao-En Ong, and Anthony K. L. Leung --
Detection of ADP-ribosylating bacterial toxins / Chen Chen and Joseph T. Barbieri --
Preparation of recombinant alphaviruses for functional studies of ADP-ribosylation / Rachy Abraham, Robert Lyle McPherson, Easwaran Sreekumar, Anthony K. L. Leung, and Diane E. Griffin --
Monitoring the sensitivity of T cell populations towards NAD+ released during cell preparation / Björn Rissiek, Marco Lukowiak, Friedrich Haag, Tim Magnus, and Friedrich Koch-Nolte --
Identifying target RNAs of PARPs / Florian J. Bock and Paul Chang --
ADPr-peptide synthesis / Hans A. V. Kistemaker, Jim Voorneveld, and Dmitri V. Filippov --
Identifying genomic sites of ADP-ribosylation mediated byspecific nuclear PARP enzymes using click-ChIP / Ryan A. Rogge, Bryan A. Gibson, and W. Lee Kraus --
Methods for using a genetically encoded fluorescent biosensor to monitor nuclear NAD+ / Michael S. Cohen, Melissa L. Stewart, Richard H. Goodman, and Xiaolu A. Cambronne.
Series Title: Methods in molecular biology (Clifton, N.J.), v. 1813.
Responsibility: edited by Paul Chang.

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