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Computational systems biology : methods and protocols

Author: Tao Huang
Publisher: New York : Humana Press : Springer, [2018] ©2018
Series: Methods in molecular biology (Clifton, N.J.), v. 1754.; Springer protocols (Series)
Edition/Format:   eBook : Document : EnglishView all editions and formats
Summary:

This volume introduces the reader to the latest experimental and bioinformatics methods for DNA sequencing, RNA sequencing, cell-free tumour DNA sequencing, single cell sequencing, single-cell  Read more...

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Genre/Form: Laboratory Manual
Electronic books
Additional Physical Format: Print version:
Computational systems biology.
New York : Springer, ©2018
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Tao Huang
ISBN: 9781493977178 1493977172
OCLC Number: 1028736576
Description: 1 online resource (xii, 417 pages) : illustrations (some color)
Contents: DNA sequencing data analysis / Keyi Long, Lei Cai, and Lin He --
Transcriptome sequencing : RNA-seq / Hong Zhang, Lin He, and Lei Cai --
Capture hybridization of long-range DNA fragments for high-throughput sequencing / Xing Chen, Gang Ni, Kai He, Zhao-Li Ding, Gui-Mei Li, Adeniyi C. Adeola, Robert W. Murphy, Wen-Zhi Wang, and Ya-Ping Zhang --
Introduction and clinical application of cell-free tumor DNA / Jun Li, Renzhong Liu, Cuihong Huang, Shifu Chen, and Mingyan Xu --
Bioinformatics analysis for cell-free tumor DNA sequencing data / Shifu Chen, Ming Liu, and Yanqing Zhou --
Overview of genome-wide association studies / Michelle Chang, Lin He, and Lei Cai --
Integrative analysis of omics big data / Xiang-Tian Yu and Tao Zeng --
Reconstruction and analysis of gene regulatory networks / Guangyong Zheng and Tao Huang --
Differential coexpression network analysis for gene expression data / Bao-Hong Liu --
iSeq : web-based RNA-seq data analysis and visualization / Chao Zhang, Caoqi Fan, Jingbo Gan, Ping Zhu, Lei Kong, and Cheng Li --
Revisit of machine learning supported biological and biomedical studies / Xiang-tian Yu, Lu Wang, and Tao Zeng --
Identifying interactions between long noncoding RNAs and diseases based on computational methods / Wei Lan, Liyu Huang, Dehuan Lai, and Qingfeng Chen --
Survey of computational approaches for prediction of DNA-binding residues on protein surfaces / Yi Xiong, Xiaolei Zhu, Hao Dai, and Dong-Qing Wei --
Computational prediction of protein O-GlcNAc modification / Cangzhi Jia and Yun Zuo --
Machine learning-based modeling of drug toxicity / Jing Lu, Dong Lu, Zunyun Fu, Mingyue Zheng, and Xiaomin Luo --
Metabolomics : a high-throughput platform for metabolite profile exploration / Jing Cheng, Wenxian Lan, Guangyong Zheng, and Xianfu Gao --
Single-cell protein assays : a review / Beiyuan Fan, Junbo Wang, Ying Xu, and Jian Chen --
Data analysis in single-cell transcriptome sequencing / Shan Gao --
Applications of single-cell sequencing for multiomics / Yungang Xu and Xiaobo Zhou --
Progress on diagnosis of tuberculous meningitis / Yi-yi Wang and Bing-di Xie --
Insights of acute lymphoblastic leukemia with development of genomic investigation / Heng Xu and Yang Shu.
Series Title: Methods in molecular biology (Clifton, N.J.), v. 1754.; Springer protocols (Series)
Responsibility: edited by Tao Huang.

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