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Gene regulatory networks : methods and protocols

Author: Guido Sanguinetti; Vân Anh Huynh-Thu
Publisher: New York, N.Y. : Humana Press ; Springer, [2018] ©2019
Series: Methods in molecular biology (Clifton, N.J.), v. 1883.
Edition/Format:   eBook : Document : EnglishView all editions and formats
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Genre/Form: Electronic books
Laboratory manuals
Laboratory Manual
Additional Physical Format: Print version:
Gene regulatory networks.
New York, N.Y : Springer, ©2019
Material Type: Document, Internet resource
Document Type: Internet Resource, Computer File
All Authors / Contributors: Guido Sanguinetti; Vân Anh Huynh-Thu
ISBN: 9781493988822 1493988824
OCLC Number: 1079421984
Description: 1 online resource (xi, 430 pages) : illustrations (some color).
Contents: Gene regulatory network inference : an introductory survey / Vân Anh Huynh-Thu and Guido Sanguinetti --
Statistical network inference for time-varying molecular data with dynamic bayesian networks / Frank Dondelinger and Sach Mukherjee --
Overview and evaluation of recent methods for statistical inference of gene regulatory networks from time series data / Marco Grzegorczyk, Andrej Aderhold and Dirk Husmeier --
Whole-transcriptome causal network inference with genomic and transcriptomic data / Lingfei Wang and Tom Michoel --
Causal queries from observational data in biological systems via bayesian networks : an empirical study in small networks / Alex White and Matthieu Vignes --
Multiattribute gaussian graphical model for inferring multiscale regulatory networks : an application in breast cancer / Julien Chiquet, Guillem Rigaill, and Martina Sundqvist --
Integrative approaches for inference of genome-scale gene regulatory networks / Alireza Fotuhi Siahpirani, Deborah Chasman, and Sushmita Roy --
Unsupervised gene network inference with decision trees and random forests / Vân Anh Huynh-Thu and Pierre Geurts --
Tree-based learning of regulatory network topologies and dynamics with jump3 / Vân Anh Huynh-Thu and Guido Sanguinetti --
Network inference from single-cell transcriptomic data / Helena Todorov, Robrecht Cannoodt, Wouter Saelens, and Yvan Saeys --
Inferring gene regulatory networks from multiple datasets / Christopher A. Penfold, Iulia Gherman, Anastasiya Sybirna, and David L. Wild --
Unsupervised GRN ensemble / Pau Bellot, Philippe Salembier, Ngoc C. Pham, and Patrick E. Meyer --
Learning differential module networks across multiple experimental conditions / Pau Erola, Eric Bonnet, and Tom Michoel --
Stability in GRN inference / Giuseppe Jurman, Michele Filosi, Roberto Visintainer, Samantha Riccadonna, and Cesare Furlanello --
Gene regulatory networks : a primer in biological processes and statistical modelling / Olivia Angelin-Bonnet, Patrick J. Biggs and Matthieu Vignes --
Scalable inference of ordinary differential equation models of biochemical processes / Fabian Fröhlich, Carolin Loos, and Jan Hasenauer.
Series Title: Methods in molecular biology (Clifton, N.J.), v. 1883.
Responsibility: edited by Guido Sanguinetti, Vân Anh Huynh-Thu.

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